CDS

Accession Number TCMCG057C08606
gbkey CDS
Protein Id XP_018471361.1
Location complement(join(35131617..35131676,35131768..35131837,35131940..35132031,35132353..35132457,35132592..35132673,35132764..35132909,35133007..35133069,35133160..35133279,35133367..35133468,35133565..35133651,35135898..35135990,35136448..35136525,35136988..35137095,35137531..35137593,35137701..35137832,35137926..35138045,35138136..35138351))
Gene LOC108842825
GeneID 108842825
Organism Raphanus sativus

Protein

Length 578aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018615859.1
Definition PREDICTED: splicing factor 3B subunit 2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Splicing factor 3B subunit 2-like
KEGG_TC -
KEGG_Module M00352        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12829        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005686        [VIEW IN EMBL-EBI]
GO:0005689        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACCGCCGAATCAGCAATCGCCGCACACGGTAAGAGCGTCGTTCCTATCGGAGATGCTTCCAACGGTGACATCACCGCTTCCTCTAAGAAATCCCGCGAGAGCGACCGTCGCCGCCGCAGGCGGAAGCAGAAGAAGAACAGAAAAGCATCACACGCCGACGTAGAAGAAGCGGACGCTTCTGATTCCAAGGAGAACGCAGATCCGCAGCAGCAGGCTTCTGAGCAGATTGTGATAGAGTATGTTCCAGAACAAGCCGAGTTTGGAGATGGTTTCAGCGACGAGTTTAAGGAGATTTTTGAGAAGTTCAGCTTTCGAGAGCCTGTTGCCTCTGAGGACGACGCTAGGAAGGATGAGTCTGAGGAGAACAAAGATGTGAAAAAGAAGGTTAACTCAGATTCTGAGGCAGACGATGAAGATCAAGGCAATGACCAAAAAGAGAAGGGAATCTCTAATAAGCAGAAGAAGCTTGAACGGAGGATGAAGATTGCTGAGCTGAAGCAGGTATCCGCTAGGCCTGATGTCGTTGAGGTCTGGGACGCTACTTCAGCAGACCCTAAATTGTTGGTGTTTTTGAAGTCGTACCGGAATACAGTTCCTGTGCCAAGACATTGGTCCCAGAAGAGAAAGTATTTGCAGGGAAAGCGAGGTATAGAGAAGCTGCCATTTCATCTTCCTGATTTCATTGCTGCCACCGGCATTCAGAAAATTAGACAGGCTTACATTGAGAAAGAAGATGGTAAAAAGTTGAAGCAAAAGCAACGGGAGCGCATGCAACCAAAGATGGGAAAAATGGACATTGACTACCAGGTTCTCCATGATGCATTCTTCAAATACCAAACAAAGCCGAAGCTGACAGCGCTTGGGGATTTGTATTTTGAAGGGAAAGAATTTGAGGTTAAACTGAGGGAAACGAAACCAGGAACATTGTCACATGACTTGAAAGAAGCTCTTGGTATGGCTGAAGGTGCTTCTCCCCCATGGCTAATCAATATGCAGCGATATGGTCCTCCCCCTTCTTACCCACATCTGAAAATTCCTGGTCTTAATGCTCCTATTCCTCATGGAGCTAGCTTTGGTTATCATGCTGGTGGCTGGGGGAAACCTCCAGTTGATGAATTTGGACGTCCATTGTATGGAGATGTCTTTGGCGTCCAGCAACAAGATCAGCCCAATTATGAGGATGAGCCTATTGATAAGAGTAAGCACTGGGGTGATTTGGAGGAGGAAGAAGAAGAAGAAGAGGAAGAGGAGGAGGAAGAACAAGAAGAGGAGATGGATGAAGAAGAACTAGAAGACGGCATGGAATCGGTCGATACACTGTCAAGCACTCCAACTGGCATTGAAACACCGGATGCAATTGAGCTTCGTAAGGAACAGAGAAAGGAACCCGATAGGGCTCTATATCAGGTACTTGAAGAGAAGGGAGAGAGTGTTGCTCCTGGAACAGTGCTGGGAACCACACACACATACGTCATTAAAACTGGTACTCAGGACAAGCCGGGAGCTAAAAGGGTTGATTTGCTTAAAGGACAAAAGACAGATCGTGTGGATGTCAGCTTACAGCCAGAAGAGCTGGAAGCCTTGGAGAATGTTTTACCTGCCAAGTATGAGGAGGCGAGAGAAGAGGAGAAACTTCGCAATAAGCCAGAGGACTTCAGTGACATGGTCGCAGAGAATTCGAAGAAAAGGAAGCGTGATAAGGAAGGAAAGAAGAAGAAAGATTTCAAATTTTGA
Protein:  
MTAESAIAAHGKSVVPIGDASNGDITASSKKSRESDRRRRRRKQKKNRKASHADVEEADASDSKENADPQQQASEQIVIEYVPEQAEFGDGFSDEFKEIFEKFSFREPVASEDDARKDESEENKDVKKKVNSDSEADDEDQGNDQKEKGISNKQKKLERRMKIAELKQVSARPDVVEVWDATSADPKLLVFLKSYRNTVPVPRHWSQKRKYLQGKRGIEKLPFHLPDFIAATGIQKIRQAYIEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTALGDLYFEGKEFEVKLRETKPGTLSHDLKEALGMAEGASPPWLINMQRYGPPPSYPHLKIPGLNAPIPHGASFGYHAGGWGKPPVDEFGRPLYGDVFGVQQQDQPNYEDEPIDKSKHWGDLEEEEEEEEEEEEEEQEEEMDEEELEDGMESVDTLSSTPTGIETPDAIELRKEQRKEPDRALYQVLEEKGESVAPGTVLGTTHTYVIKTGTQDKPGAKRVDLLKGQKTDRVDVSLQPEELEALENVLPAKYEEAREEEKLRNKPEDFSDMVAENSKKRKRDKEGKKKKDFKF